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Automatic tracking of labeled red blood cells in microchannels

dc.contributor.authorPinho, Diana
dc.contributor.authorLima, Rui A.
dc.contributor.authorPereira, Ana I.
dc.contributor.authorGayubo, Fernando
dc.date.accessioned2014-09-08T14:17:44Z
dc.date.available2014-09-08T14:17:44Z
dc.date.issued2013
dc.description.abstractThe current study proposes an automatic method for the segmentation and tracking of red blood cells flowing through a 100- m glass capillary. The original images were obtained by means of a confocal system and then processed in MATLAB using the Image Processing Toolbox. The measurements obtained with the proposed automatic method were compared with the results determined by a manual tracking method. The comparison was performed by using both linear regressions and Bland–Altman analysis. The results have shown a good agreement between the two methods. Therefore, the proposed automatic method is a powerful way to provide rapid and accurate measurements for in vitro blood experiments in microchannels.por
dc.description.sponsorshipThe authors acknowledge the financial support provided by: Student Mobility Placements with the program Lifelong Learning(Erasmus Program), PTDC/SAUBEB/108728/2008, PTDC/SAU-BEB/105650/2008, PTDC/EMEMFE/099109/2008 and PTDC/SAU-ENB/116929/2010 from the FCT (Science and Technology Foundation) and COMPETE, Portugal.
dc.identifier.citationPinho, D.; Lima, R.; Pereira, Ana I.; Gayubo, F. (2013). Automatic tracking of labeled red blood cells in microchannels. International Journal for Numerical Methods in Biomedical Engineering. ISSN 2040-7947. 29, p. 977-987por
dc.identifier.doi10.1002/cnm.2526
dc.identifier.urihttp://hdl.handle.net/10198/10355
dc.language.isoengpor
dc.peerreviewedyespor
dc.publisherJohn Wiley & Sonspor
dc.relation116929/2010
dc.relationBIOMIMETIC - A biomimetic microdevice for the diagnosis of erythrocytes diseases based on their deformability
dc.relationHemo-Networks - Experimental and computational investigations of the factors influencing blood flow in microvascular networks.
dc.relationANEURYSM - Hemodynamic Study in Cerebral Aneurysms
dc.subjectImage analysispor
dc.subjectAutomatic methodpor
dc.subjectRed blood cellspor
dc.subjectIn vitro blood flowpor
dc.titleAutomatic tracking of labeled red blood cells in microchannelspor
dc.typejournal article
dspace.entity.typePublication
oaire.awardTitleBIOMIMETIC - A biomimetic microdevice for the diagnosis of erythrocytes diseases based on their deformability
oaire.awardTitleHemo-Networks - Experimental and computational investigations of the factors influencing blood flow in microvascular networks.
oaire.awardTitleANEURYSM - Hemodynamic Study in Cerebral Aneurysms
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/5876-PPCDTI/PTDC%2FSAU-ENB%2F116929%2F2010/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/5876-PPCDTI/PTDC%2FSAU-BEB%2F108728%2F2008/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/5876-PPCDTI/PTDC%2FSAU-BEB%2F105650%2F2008/PT
oaire.awardURIinfo:eu-repo/grantAgreement/FCT/5876-PPCDTI/PTDC%2FEME-MFE%2F099109%2F2008/PT
oaire.citation.endPage987por
oaire.citation.startPage977por
oaire.citation.titleInternational journal for numerical methods in biomedical engineeringpor
oaire.citation.volume29por
oaire.fundingStream5876-PPCDTI
oaire.fundingStream5876-PPCDTI
oaire.fundingStream5876-PPCDTI
oaire.fundingStream5876-PPCDTI
person.familyNamePinho
person.familyNameLima
person.familyNamePereira
person.givenNameDiana
person.givenNameRui A.
person.givenNameAna I.
person.identifier.ciencia-id5214-ED0C-35E8
person.identifier.ciencia-idEE12-C3FB-349D
person.identifier.ciencia-id0716-B7C2-93E4
person.identifier.orcid0000-0002-3884-6496
person.identifier.orcid0000-0003-3428-637X
person.identifier.orcid0000-0003-3803-2043
person.identifier.ridH-5157-2016
person.identifier.ridF-3168-2010
person.identifier.scopus-author-id18437397800
person.identifier.scopus-author-id15071961600
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.identifierhttp://doi.org/10.13039/501100001871
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
project.funder.nameFundação para a Ciência e a Tecnologia
rcaap.rightsopenAccesspor
rcaap.typearticlepor
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